Please note: due to the ambiguity of author names, it is extremely hard to be confident about authorships. There may be errors in the names or attributions of these author pages. Please check the actual publication pages for more accurate information.

Vladislav V Verkhusha

  1. Common Pathway for the Red Chromophore Formation in Fluorescent Proteins and Chromoproteins

    Verkhusha Vv, Chudakov Dm, Gurskaya Ng, Lukyanov S, Lukyanov Ka

    (2004). Chemistry & Biology, 11(6) , 845-854. doi: 10.1016/j.chembiol.2004.04.007. Article   Pubmed

      Primary Proteins:
      Additional Proteins:
    1. cgigCP

  2. Photoswitchable cyan fluorescent protein for protein tracking

    Chudakov Dm, Verkhusha Vv, Staroverov Db, Souslova Ea, Lukyanov S, Lukyanov Ka

    (2004). Nature Biotechnology, 22(11) , 1435-1439. doi: 10.1038/nbt1025. Article   Pubmed

      Primary Proteins:
    1. PS-CFP

  3. Engineering of a monomeric green-to-red photoactivatable fluorescent protein induced by blue light

    Gurskaya Ng, Verkhusha Vv, Shcheglov As, Staroverov Db, Chepurnykh Tv, Fradkov Af, Lukyanov S, Lukyanov Ka

    (2006). Nature Biotechnology, 24(4) , 461-465. doi: 10.1038/nbt1191. Article   Pubmed

      Primary Proteins:
    1. Dendra
    2. Dendra2

  4. Conversion of Red Fluorescent Protein into a Bright Blue Probe

    Subach Om, Gundorov Is, Yoshimura M, Subach Fv, Zhang J, Grüenwald D, Souslova Ea, Chudakov Dm, Verkhusha Vv

    (2008). Chemistry & Biology, 15(10) , 1116-1124. doi: 10.1016/j.chembiol.2008.08.006. Article   Pubmed

      Primary Proteins:
    1. HcRed1-Blue
    2. TagBFP
    3. TagGFP
    4. TagGFP2
      Additional Proteins:
    1. Azurite
    2. EBFP2
    3. HcRed

  5. Monomeric fluorescent timers that change color from blue to red report on cellular trafficking

    Subach Fv, Subach Om, Gundorov Is, Morozova Ks, Piatkevich Kd, Cuervo Am, Verkhusha Vv

    (2009). Nature Chemical Biology, 5(2) , 118-126. doi: 10.1038/nchembio.138. Article   Pubmed

      Primary Proteins:
    1. Fast-FT
    2. Medium-FT
    3. Slow-FT

  6. Photoactivatable mCherry for high-resolution two-color fluorescence microscopy

    Subach Fv, Patterson Gh, Manley S, Gillette Jm, Lippincott-Schwartz J, Verkhusha Vv

    (2009). Nature Methods, 6(2) , 153-159. doi: 10.1038/nmeth.1298. Article   Pubmed

      Primary Proteins:
    1. PAmCherry1
    2. PAmCherry2
    3. PAmCherry3

  7. Far-red fluorescent tags for protein imaging in living tissues

    Shcherbo D, Murphy Cs, Ermakova Gv, Solovieva Ea, Chepurnykh Tv, Shcheglov As, Verkhusha Vv, Pletnev Vz, Hazelwood Kl, Roche Pm, Lukyanov S, Zaraisky Ag, Davidson Mw, Chudakov Dm

    (2009). Biochemical Journal, 418(3) , 567-574. doi: 10.1042/bj20081949. Article   Pubmed

      Primary Proteins:
    1. mKate2
    2. tdKatushka2

  8. Understanding Blue-to-Red Conversion in Monomeric Fluorescent Timers and Hydrolytic Degradation of Their Chromophores

    Pletnev S, Subach Fv, Dauter Z, Wlodawer A, Verkhusha Vv

    (2010). Journal of the American Chemical Society, 132(7) , 2243-2253. doi: 10.1021/ja908418r. Article   Pubmed

      Primary Proteins:
    1. Blue102

  9. Monomeric red fluorescent proteins with a large Stokes shift

    Piatkevich Kd, Hulit J, Subach Om, Wu B, Abdulla A, Segall Je, Verkhusha Vv

    (2010). Proceedings of the National Academy of Sciences, 107(12) , 5369-5374. doi: 10.1073/pnas.0914365107. Article   Pubmed

      Primary Proteins:
    1. LSS-mKate1
    2. LSS-mKate2

  10. Bright Monomeric Photoactivatable Red Fluorescent Protein for Two-Color Super-Resolution sptPALM of Live Cells

    Subach Fv, Patterson Gh, Renz M, Lippincott-Schwartz J, Verkhusha Vv

    (2010). Journal of the American Chemical Society, 132(18) , 6481-6491. doi: 10.1021/ja100906g. Article   Pubmed

      Primary Proteins:
    1. PATagRFP
    2. PATagRFP1297
    3. PATagRFP1314

  11. Far-Red Fluorescent Protein Excitable with Red Lasers for Flow Cytometry and Superresolution STED Nanoscopy

    Morozova Ks, Piatkevich Kd, Gould Tj, Zhang J, Bewersdorf J, Verkhusha Vv

    (2010). Biophysical Journal, 99(2) , L13-L15. doi: 10.1016/j.bpj.2010.04.025. Article   Pubmed

      Primary Proteins:
    1. TagRFP657

  12. Red Fluorescent Protein with Reversibly Photoswitchable Absorbance for Photochromic FRET

    Subach Fv, Zhang L, Gadella Twj, Gurskaya Ng, Lukyanov Ka, Verkhusha Vv

    (2010). Chemistry & Biology, 17(7) , 745-755. doi: 10.1016/j.chembiol.2010.05.022. Article   Pubmed

      Primary Proteins:
    1. rsTagRFP

  13. Bright and stable near-infrared fluorescent protein for in vivo imaging

    Filonov Gs, Piatkevich Kd, Ting L-M, Zhang J, Kim K, Verkhusha Vv

    (2011). Nature Biotechnology, 29(8) , 757-761. doi: 10.1038/nbt.1918. Article   Pubmed

      Primary Proteins:
    1. iRFP713

  14. A photoswitchable orange-to-far-red fluorescent protein, PSmOrange

    Subach Om, Patterson Gh, Ting L-M, Wang Y, Condeelis Js, Verkhusha Vv

    (2011). Nature Methods, 8(9) , 771-777. doi: 10.1038/nmeth.1664. Article   Pubmed

      Primary Proteins:
    1. PSmOrange

  15. Superresolution Imaging of Multiple Fluorescent Proteins with Highly Overlapping Emission Spectra in Living Cells

    Gunewardene Ms, Subach Fv, Gould Tj, Penoncello Gp, Gudheti Mv, Verkhusha Vv, Hess St

    (2011). Biophysical Journal, 101(6) , 1522-1528. doi: 10.1016/j.bpj.2011.07.049. Article   Pubmed

      Primary Proteins:
    1. PAmKate

  16. An Enhanced Monomeric Blue Fluorescent Protein with the High Chemical Stability of the Chromophore

    Subach Om, Cranfill Pj, Davidson Mw, Verkhusha Vv

    (2011). PLoS ONE, 6(12) , e28674. doi: 10.1371/journal.pone.0028674. Article   Pubmed

      Primary Proteins:
    1. mTagBFP2

  17. A Structural Basis for Reversible Photoswitching of Absorbance Spectra in Red Fluorescent Protein rsTagRFP

    Pletnev S, Subach Fv, Dauter Z, Wlodawer A, Verkhusha Vv

    (2012). Journal of Molecular Biology, 417(3) , 144-151. doi: 10.1016/j.jmb.2012.01.044. Article   Pubmed

      Primary Proteins:
      Additional Proteins:
    1. rsTagRFP

  18. An Orange Fluorescent Protein with a Large Stokes Shift for Single-Excitation Multicolor FCCS and FRET Imaging

    Shcherbakova Dm, Hink Ma, Joosen L, Gadella Twj, Verkhusha Vv

    (2012). Journal of the American Chemical Society, 134(18) , 7913-7923. doi: 10.1021/ja3018972. Article   Pubmed

      Primary Proteins:
    1. LSSmOrange

  19. A FRET-Facilitated Photoswitching Using an Orange Fluorescent Protein with the Fast Photoconversion Kinetics

    Subach Om, Entenberg D, Condeelis Js, Verkhusha Vv

    (2012). Journal of the American Chemical Society, 134(36) , 14789-14799. doi: 10.1021/ja3034137. Article   Pubmed

      Primary Proteins:
    1. PSmOrange2

  20. Cysteineless non-glycosylated monomeric blue fluorescent protein, secBFP2, for studies in the eukaryotic secretory pathway

    Costantini Lm, Subach Om, Jaureguiberry-Bravo M, Verkhusha Vv, Snapp El

    (2013). Biochemical and Biophysical Research Communications, 430(3) , 1114-1119. doi: 10.1016/j.bbrc.2012.12.028. Article   Pubmed

      Primary Proteins:
    1. secBFP2

  21. Extended Stokes Shift in Fluorescent Proteins: Chromophore–Protein Interactions in a Near-Infrared TagRFP675 Variant

    Piatkevich Kd, Malashkevich Vn, Morozova Ks, Nemkovich Na, Almo Sc, Verkhusha Vv

    (2013). Scientific Reports, 3(1) , 1847. doi: 10.1038/srep01847. Article   Pubmed

      Primary Proteins:
    1. TagRFP675

  22. Near-infrared fluorescent proteins for multicolor in vivo imaging

    Shcherbakova Dm, Verkhusha Vv

    (2013). Nature Methods, 10(8) , 751-754. doi: 10.1038/nmeth.2521. Article

      Primary Proteins:
    1. iRFP670
    2. iRFP682
    3. iRFP702
    4. iRFP720
      Additional Proteins:
    1. RpBphP6

  23. Photoswitchable Red Fluorescent Protein with a Large Stokes Shift

    Piatkevich Kd, English Bp, Malashkevich Vn, Xiao H, Almo Sc, Singer Rh, Verkhusha Vv

    (2014). Chemistry & Biology, 21(10) , 1402-1414. doi: 10.1016/j.chembiol.2014.08.010. Article   Pubmed

      Primary Proteins:
    1. PSLSSmKate

  24. A palette of fluorescent proteins optimized for diverse cellular environments

    Costantini Lm, Baloban M, Markwardt Ml, Rizzo M, Guo F, Verkhusha Vv, Snapp El

    (2015). Nature Communications, 6(1) , 7670. doi: 10.1038/ncomms8670. Article   Pubmed

      Primary Proteins:
    1. moxBFP
    2. moxCerulean3
    3. moxGFP
    4. moxNeonGreen
    5. moxVenus
    6. oxBFP
    7. oxCerulean
    8. oxGFP
    9. oxVenus

  25. Allosteric effects of chromophore interaction with dimeric near-infrared fluorescent proteins engineered from bacterial phytochromes

    Stepanenko Ov, Baloban M, Bublikov Gs, Shcherbakova Dm, Stepanenko Ov, Turoverov Kk, Kuznetsova Im, Verkhusha Vv

    (2016). Scientific Reports, 6(1) , 18750. doi: 10.1038/srep18750. Article   Pubmed

      Primary Proteins:
    1. iRFP713/V256C

  26. Fluorescence from Multiple Chromophore Hydrogen-Bonding States in the Far-Red Protein TagRFP675

    Konold Pe, Yoon E, Lee J, Allen Sl, Chapagain Pp, Gerstman Bs, Regmi Ck, Piatkevich Kd, Verkhusha Vv, Joo T, Jimenez R

    (2016). The Journal of Physical Chemistry Letters, 7(15) , 3046-3051. doi: 10.1021/acs.jpclett.6b01172. Article   Pubmed

      Primary Proteins:
      Additional Proteins:
    1. TagRFP675

  27. Bright monomeric near-infrared fluorescent proteins as tags and biosensors for multiscale imaging

    Shcherbakova Dm, Baloban M, Emelyanov Av, Brenowitz M, Guo P, Verkhusha Vv

    (2016). Nature Communications, 7, 12405. doi: 10.1038/ncomms12405. Article   Pubmed

      Primary Proteins:
    1. miRFP670
    2. miRFP670v1
    3. miRFP703
    4. miRFP709
      Additional Proteins:
    1. iFP2.0
    2. RpBphP1

  28. moxDendra2: an inert photoswitchable protein for oxidizing environments

    Kaberniuk Aa, Morano Nc, Verkhusha Vv, Snapp El

    (2017). Chemical Communications, 53(13) , 2106-2109. doi: 10.1039/c6cc09997a. Article   Pubmed

      Primary Proteins:
    1. moxDendra2
    2. moxEos3.2
      Additional Proteins:
    1. Dendra2

  29. How to Increase Brightness of Near-Infrared Fluorescent Proteins in Mammalian Cells

    Shemetov Aa, Oliinyk Os, Verkhusha Vv

    (2017). Cell Chemical Biology, 24(6) , 758-766.e3. doi: 10.1016/j.chembiol.2017.05.018. Article   Pubmed

      Primary Proteins:
      Additional Proteins:
    1. miRFP670

  30. Direct multiplex imaging and optogenetics of Rho GTPases enabled by near-infrared FRET

    Shcherbakova Dm, Cox Cammer N, Huisman Tm, Verkhusha Vv, Hodgson L

    (2018). Nature Chemical Biology, 14(6) , 591-600. doi: 10.1038/s41589-018-0044-1. Article   Pubmed

      Primary Proteins:
    1. miRFP720

  31. Fast reversibly photoswitching red fluorescent proteins for live-cell RESOLFT nanoscopy

    Pennacchietti F, Serebrovskaya Eo, Faro Ar, Shemyakina Ii, Bozhanova Ng, Kotlobay Aa, Gurskaya Ng, Bodén A, Dreier J, Chudakov Dm, Lukyanov Ka, Verkhusha Vv, Mishin As, Testa I

    (2018). Nature Methods, 15(8) , 601-604. doi: 10.1038/s41592-018-0052-9. Article   Pubmed

      Primary Proteins:
    1. rsFusionRed1
    2. rsFusionRed2
    3. rsFusionRed3

  32. moxMaple3: a Photoswitchable Fluorescent Protein for PALM and Protein Highlighting in Oxidizing Cellular Environments

    Kaberniuk Aa, Mohr Ma, Verkhusha Vv, Snapp El

    (2018). Scientific Reports, 8(1) , 14738. doi: 10.1038/s41598-018-32955-5. Article   Pubmed

      Primary Proteins:
    1. moxMaple3
      Additional Proteins:
    1. mMaple3

  33. Smallest near-infrared fluorescent protein evolved from cyanobacteriochrome as versatile tag for spectral multiplexing

    Oliinyk Os, Shemetov Aa, Pletnev S, Shcherbakova Dm, Verkhusha Vv

    (2019). Nature Communications, 10(1) , 279. doi: 10.1038/s41467-018-08050-8. Article   Pubmed

      Primary Proteins:
    1. miRFP670nano

  34. A set of monomeric near-infrared fluorescent proteins for multicolor imaging across scales

    Matlashov Me, Shcherbakova Dm, Alvelid J, Baloban M, Pennacchietti F, Shemetov Aa, Testa I, Verkhusha Vv

    (2020). Nature Communications, 11(1) , 239. doi: 10.1038/s41467-019-13897-6. Article   Pubmed

      Primary Proteins:
    1. emiRFP670
    2. emiRFP703
    3. miRFP670-2
    4. miRFP680
    5. miRFP682
    6. miRFP702
    7. miRFP713

  35. Single-domain near-infrared protein provides a scaffold for antigen-dependent fluorescent nanobodies

    Oliinyk Os, Baloban M, Clark Cl, Carey E, Pletnev S, Nimmerjahn A, Verkhusha Vv

    (2022). Nature Methods, 19(6) , 740-750. doi: 10.1038/s41592-022-01467-6. Article   Pubmed

      Primary Proteins:
    1. miRFP670nano3

  36. Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms

    Pennacchietti F, Alvelid J, Morales Ra, Damenti M, Ollech D, Oliinyk Os, Shcherbakova Dm, Villablanca Ej, Verkhusha Vv, Testa I

    (2023). Nature Communications, 14(1) , . doi: 10.1038/s41467-023-44054-9. Article

      Primary Proteins:
      Additional Proteins:
    1. miRFP720