Nadya V Pletneva

1. Structural Basis for Phototoxicity of the Genetically Encoded Photosensitizer KillerRed

   Pletnev S, Gurskaya Ng, Pletneva Nv, Lukyanov Ka, Chudakov Dm, Martynov Vi, Popov Vo, Kovalchuk Mv, Wlodawer A, Dauter Z, Pletnev V

   (2009). Journal of Biological Chemistry, 284(46) , 32028-32039. doi: 10.1074/jbc.m109.054973. Article   Pubmed

   Primary Proteins:

   Additional Proteins:

   1. KillerRed

2. Structural Evidence for a Dehydrated Intermediate in Green Fluorescent Protein Chromophore Biosynthesis

   Pletneva Nv, Pletnev Vz, Lukyanov Ka, Gurskaya Ng, Goryacheva Ea, Martynov Vi, Wlodawer A, Dauter Z, Pletnev S

   (2010). Journal of Biological Chemistry, 285(21) , 15978-15984. doi: 10.1074/jbc.m109.092320. Article   Pubmed

   Primary Proteins:

   1. aceGFP
   2. aceGFP-G222E-Y220L

3. Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore

   Pletneva Nv, Pletnev Vz, Shemiakina Ii, Chudakov Dm, Artemyev I, Wlodawer A, Dauter Z, Pletnev S

   (2011). Protein Science, 20(7) , 1265-1274. doi: 10.1002/pro.654. Article   Pubmed

   Primary Proteins:

   Additional Proteins:

   1. Katushka

4. Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis

   Pletneva Nv, Pletnev Vz, Souslova E, Chudakov Dm, Lukyanov S, Martynov Vi, Arhipova S, Artemyev I, Wlodawer A, Dauter Z, Pletnev S

   (2013). Acta Crystallographica Section D Biological Crystallography, 69(6) , 1005-1012. doi: 10.1107/s0907444913004034. Article   Pubmed

   Primary Proteins:

   1. phiYFPv

5. Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine

   Pletnev Vz, Pletneva Nv, Lukyanov Ka, Souslova Ea, Fradkov Af, Chudakov Dm, Chepurnykh T, Yampolsky Iv, Wlodawer A, Dauter Z, Pletnev S

   (2013). Acta Crystallographica Section D Biological Crystallography, 69(9) , 1850-1860. doi: 10.1107/s0907444913015424. Article   Pubmed

   Primary Proteins:

   1. laGFP
   2. lanRFP-ΔS83l
   3. laRFP

6. Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore

   Pletnev Vz, Pletneva Nv, Sarkisyan Ks, Mishin As, Lukyanov Ka, Goryacheva Ea, Ziganshin Rh, Dauter Z, Pletnev S

   (2015). Acta Crystallographica Section D Biological Crystallography, 71(8) , 1699-1707. doi: 10.1107/s1399004715010159. Article

   Primary Proteins:

   Additional Proteins:

   1. NowGFP

7. Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore

   Pletneva Nv, Pletnev Vz, Sarkisyan Ks, Gorbachev Da, Egorov Es, Mishin As, Lukyanov Ka, Dauter Z, Pletnev S

   (2015). PLOS ONE, 10(12) , e0145740. doi: 10.1371/journal.pone.0145740. Article   Pubmed

   Primary Proteins:

   1. mKillerOrange

   Additional Proteins:

   1. KillerOrange

8. Crystal structure of the fluorescent protein fromDendronephthyasp. in both green and photoconverted red forms

   Pletneva Nv, Pletnev S, Pakhomov Aa, Chertkova Rv, Martynov Vi, Muslinkina L, Dauter Z, Pletnev Vz

   (2016). Acta Crystallographica Section D Structural Biology, 72(8) , 922-932. doi: 10.1107/s205979831601038x. Article   Pubmed

   Primary Proteins:

   Additional Proteins:

   1. dendFP

9. Three-dimensional structure of a pH-dependent fluorescent protein WasCFP with a tryptophan based deprotonated chromophore

   Pletnev Vz, Pletneva Nv, Efremov Rg, Goryacheva Ea, Artemyev Iv, Arkhipova Sf, Sarkisyan Ks, Mishin As, Lukyanov Ka, Pletnev Sv

   (2017). Russian Journal of Bioorganic Chemistry, 42(6) , 612-618. doi: 10.1134/s1068162016050149. Article

   Primary Proteins:

   Additional Proteins:

   1. WasCFP